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StepReg: Stepwise Regression Analysis22 days ago
Introduction | Quick demo | Key features | Regression categories | Model selection strategies | Selection metrics | Advanced Features | Strata Variables in Cox Regression | Continuous-Nested-Within-Class Effects | Multivariate multiple regression for linear regression | Formula Syntax Summary | Multicollinearity | StepReg output | Use cases | Linear regression with the mtcars dataset | Example1: single dependent variable ("mpg"), and apply continuous-nested-within-class variables | Example2: multivariate regression ("mpg" and "drat") | Logistic regression with the remission dataset | Example1: using "forward" strategy | Example2: using "subset" strategy | Cox regression with the lung dataset | Example1: using "forward" strategy with strata function in the formula | Poisson regression with the creditCard dataset | Interactive app | Session info
StepRegShiny: A shiny Application for StepReg8 months ago
Interactive app | Session info
ZetaSuite: A Comprehensive Guide to Multi-dimensional High-throughput Data Analysis12 months ago
Introduction | Overview | Key Features | Applications | Installation and Setup | R Package Installation | Interactive Shiny Application | Original ZetaSuite Installation | Example Dataset | Analysis Workflow | Step 1: Quality Control Analysis | QC Plot 1: Score Distribution | QC Plot 2: t-SNE Visualization | QC Plot 3: Box Plots | QC Plot 4: SSMD Distribution | Step 2: Z-score Normalization | Step 3: Event Coverage Analysis | Event Coverage Plots | Step 4: Zeta Score Calculation | Step 5: SVM Background Correction (Optional) | Step 6: Screen Strength Analysis | Zeta Score Distribution by Gene Type | Screen Strength Curves | FDR Cutoff Results | Step 7: Hit Selection | Single Cell RNA-seq Quality Control | Advanced Usage | Custom Parameter Settings | Batch Processing | Interpretation Guidelines | Quality Control Interpretation | Zeta Score Interpretation | Screen Strength Interpretation | Troubleshooting | Common Issues | Performance Optimization | References | Software Citation | Dataset Citation | Session Information